Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875246.1_cds_XP_016435743.1_31673
CDS Infomation

[gene=LOC107761962] [db_xref=GeneID:107761962] [protein=isoamylase 3, chloroplastic-like] [protein_id=XP_016435743.1] [location=join(9427..9555,17918..18154,18436..18540,19387..19491,20328..20462,20587..20673,27827..27884,29986..30049,31066..31165,32940..33040,34192..34270)] [gbkey=CDS]
Sequence

ATGTATATCTGCTTAAAGCATGCTGAGCTAATGTACTTCTTTGGAATGCCTGACAGTGAT
GGAATGATTGAATTAGCGCTGGACCCACAGAAGAATCGCACGGTGAACATATGGCACATA
TGCATTAAGGAGTTGCCTCGTGGCGACGTCCTCTATGGTTATCGCATTGATGGTCCTCAA
AGTTGGCATGAAGGGCATCGATTTGACAATAGCATTGTTTTGATTGATCCTTACGCGAAA
CTAATTGAAGGTCGGCGAGCTTTTGGAGATGTTAGCAACAAAATATGTAGATTTTTTGGA
ACTTACGATTTCAATACCTTGCCTTTTGACTGGGGAGAAAGTTACAAGCTTCCAAATATA
CCCGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCTTTTACTGCTGATGAATCA
AGTGGTTTGGATCCAGATCAACGGGGAAGCTACCTTGGTGTGATTGAAAAGATACCACAT
CTTCTGGAGCTTGGTGTTAATGCAGTAGAATTAATGCCTGTCTTTGAGTTTGATGAACTG
GAGTTTCAAAGGCGACCTAATCCGAGAGATCACATGATCAATACGTGGGGTTACTCAACA
ATAAACTTTTTTGCTCCAATGAGTCGATATGCAAGTTGTGCTGGGGGACCCGTCAGTGCT
TCTCGGGAGTTCAAACAAATGGTCAAGGCCTTGCATGATGCTGGAATTGAGGTCATTTTA
GATGTTGTTTATAATCACACTAATGAAGCTGATGACAAAAACCCGTATACCACCTCATTC
CGAGGAATAGACAACAAGGTTTATTACATGGTGGATTTGAACAATAATGGTCAGCTGCTG
AACTTTTCTGGATGTGGAAATACTTTTAACTGCAACCACCCTGTAGTCATGGAACTTATA
CTTGAAAGCTTAAGACACTGGGTCGCCGAGTATCATGTCGATGGATTTCGCTTTGATCTT
GCTAGTGTTCTTTGCCGAGGGACAGATGGTACTCCCATTAATGCTCCCCCCCTTGTGAAG
GCCATTGCCAAAGATAGTGTACTGTCGAGGTGCAAAATTATTGCTGAGCCATGGGATTGT
GGAGGCCTTTATCTTGTTGGAAAGTTTCCAAACTGGGACCGGTGGGCTGAGTGGAACGGG
AAGTATCGTGATGACATTAGGAGATTTATAAAGGTGACTCTAGGAGACAATCTGAATTGA

Peptide Sequence

PEP ID

XP_016435743.1
PEP Infomation

PREDICTED: isoamylase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MYICLKHAELMYFFGMPDSDGMIELALDPQKNRTVNIWHICIKELPRGDVLYGYRIDGPQ
SWHEGHRFDNSIVLIDPYAKLIEGRRAFGDVSNKICRFFGTYDFNTLPFDWGESYKLPNI
PEKDLVIYEMNVRAFTADESSGLDPDQRGSYLGVIEKIPHLLELGVNAVELMPVFEFDEL
EFQRRPNPRDHMINTWGYSTINFFAPMSRYASCAGGPVSASREFKQMVKALHDAGIEVIL
DVVYNHTNEADDKNPYTTSFRGIDNKVYYMVDLNNNGQLLNFSGCGNTFNCNHPVVMELI
LESLRHWVAEYHVDGFRFDLASVLCRGTDGTPINAPPLVKAIAKDSVLSRCKIIAEPWDC
GGLYLVGKFPNWDRWAEWNGKYRDDIRRFIKVTLGDNLN

Transcript Sequence

Gene sequence data has not been registered.